STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0H8E4_9BRASBZIP domain-containing protein. (169 aa)    
Predicted Functional Partners:
R0I5F4_9BRAS
AP2/ERF domain-containing protein.
  
   
 0.783
R0FMV2_9BRAS
BZIP domain-containing protein.
      
 0.760
R0HJ98_9BRAS
BZIP domain-containing protein.
      
0.615
R0GIK7_9BRAS
Uncharacterized protein.
  
     0.515
R0F5N0_9BRAS
BHLH domain-containing protein.
  
     0.514
R0GS44_9BRAS
ANK_REP_REGION domain-containing protein.
  
     0.514
R0HU78_9BRAS
Uncharacterized protein.
  
     0.509
R0IAS5_9BRAS
Dof-type domain-containing protein.
  
   
 0.505
R0I577_9BRAS
ANK_REP_REGION domain-containing protein.
  
     0.500
R0GCD2_9BRAS
CUE domain-containing protein.
  
     0.483
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.