STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FY07_9BRASAP2/ERF domain-containing protein. (290 aa)    
Predicted Functional Partners:
R0I4B7_9BRAS
Response regulatory domain-containing protein.
      
 0.731
R0GNJ6_9BRAS
Response regulatory domain-containing protein.
      
 0.710
R0HK04_9BRAS
Two-component response regulator; Transcriptional activator that binds specific DNA sequence.
    
 
 0.679
R0FVX1_9BRAS
Two-component response regulator; Transcriptional activator that binds specific DNA sequence.
      
 0.600
R0HC39_9BRAS
Dof-type domain-containing protein.
  
   
 0.569
R0HL57_9BRAS
WHy domain-containing protein.
      
 0.566
R0GZQ1_9BRAS
Uncharacterized protein.
  
   
 0.542
R0HHL4_9BRAS
Response regulatory domain-containing protein.
      
 0.541
R0GT34_9BRAS
Dof-type domain-containing protein.
  
     0.515
R0FUE1_9BRAS
Dof-type domain-containing protein.
  
     0.513
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.