STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0G1V4_9BRASAP2/ERF domain-containing protein. (173 aa)    
Predicted Functional Partners:
R0G7L7_9BRAS
GLOBIN domain-containing protein; Belongs to the globin family.
   
  
 0.667
R0HA40_9BRAS
Uncharacterized protein.
   
  
 0.547
R0ICU9_9BRAS
Aldo_ket_red domain-containing protein.
      
 0.541
R0G4X4_9BRAS
Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
      
 0.514
R0GMV3_9BRAS
Pectinesterase domain-containing protein.
      
 0.514
R0GRN8_9BRAS
Uncharacterized protein.
   
  
 0.508
R0FSX2_9BRAS
Dof-type domain-containing protein.
  
     0.503
R0HLJ2_9BRAS
Uncharacterized protein.
  
     0.500
R0GX21_9BRAS
Dof-type domain-containing protein.
  
     0.499
R0GXA8_9BRAS
Dof-type domain-containing protein.
  
     0.498
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.