STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0I355_9BRASUncharacterized protein. (341 aa)    
Predicted Functional Partners:
R0F1Q4_9BRAS
VEFS-Box domain-containing protein.
      
 0.984
R0FYN5_9BRAS
Uncharacterized protein.
      
 0.921
R0F048_9BRAS
Fibronectin type-III domain-containing protein.
      
 0.910
R0HIQ8_9BRAS
Uncharacterized protein.
      
 0.883
R0G959_9BRAS
FRIGIDA-like protein; Belongs to the Frigida family.
      
 0.882
R0EYA7_9BRAS
Uncharacterized protein.
      
 0.880
R0H6Y6_9BRAS
Chromo domain-containing protein.
      
 0.857
R0GLL7_9BRAS
RING-type domain-containing protein.
      
 0.855
R0ISF0_9BRAS
RING-type domain-containing protein.
      
 0.848
R0HRU1_9BRAS
Uncharacterized protein.
   
 0.846
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (28%) [HD]