Groups of genes that are frequently observed in each other's genomic neighborhood.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein; Encoded by transcript CARUB_v10009957m (280 aa)
Predicted Functional Partners:
Uncharacterized protein; Encoded by transcript CARUB_v10001393m; Belongs to the cyclin family (334 aa)
Uncharacterized protein; Encoded by transcript CARUB_v10020009m (603 aa)
Uncharacterized protein; Encoded by transcript CARUB_v10026852m (304 aa)
Uncharacterized protein; Encoded by transcript CARUB_v10004163m (806 aa)
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (744 aa)
Uncharacterized protein; Encoded by transcript CARUB_v10009816m (311 aa)
Uncharacterized protein; Encoded by transcript CARUB_v10014211m (318 aa)
Uncharacterized protein; Encoded by transcript CARUB_v10028379m (733 aa)
Uncharacterized protein; Encoded by transcript CARUB_v10014231m; Belongs to the iron/ascorbate-dependent oxidoreductase family (310 aa)
Uncharacterized protein; Encoded by transcript CARUB_v10020411m (399 aa)
Your Current Organism:
NCBI taxonomy Id: 81985 Other names: C. rubella, Capsella rubella, Capsella rubella Reut.