STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBR/BPC2GAGA-binding transcriptional activator. (277 aa)    
Predicted Functional Partners:
R0HSH9_9BRAS
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
      
 0.751
R0FD64_9BRAS
CXC domain-containing protein.
   
  
 0.610
R0EW31_9BRAS
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.607
R0IBZ2_9BRAS
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.549
R0FBK7_9BRAS
RRM domain-containing protein.
      
 0.540
R0H7D6_9BRAS
Uncharacterized protein.
      
 0.518
R0HVC0_9BRAS
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.509
R0HZX7_9BRAS
Uncharacterized protein.
  
     0.505
R0FMV0_9BRAS
Uncharacterized protein.
  
     0.503
R0FBA0_9BRAS
Uncharacterized protein.
  
     0.496
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.