STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO31977.1Uncharacterized membrane protein. (415 aa)    
Predicted Functional Partners:
UraH
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.913
PuuE
OHCU decarboxylase.
 
    0.887
SFO91914.1
Ureidoglycolate lyase.
 
    0.838
XdhC
Molybdenum cofactor sulfurylase.
 
     0.760
XdhA
Xanthine dehydrogenase small subunit.
 
     0.751
XdhB
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
     0.749
SFO32118.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.707
SFO32006.1
Threonine/homoserine/homoserine lactone efflux protein.
       0.566
SFO31923.1
Cytosine/adenosine deaminase.
 
     0.553
SFO31896.1
Permease family protein.
 
    0.527
Your Current Organism:
Paracoccus pantotrophus
NCBI taxonomy Id: 82367
Other names: ATCC 35512, DSM 2944, JCM 21485, LMD 82.5, NBRC 102493, NCCB 82005, P. pantotrophus, Thiosphaera pantotropha, strain GB 17, strain GB17
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