STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYJ10_20915Unannotated protein; Belongs to the pirin family. (305 aa)    
Predicted Functional Partners:
GCA_000974605_00539
Unannotated protein.
       0.773
CYJ10_00015
Unannotated protein.
 
  
 0.724
ssuD
Unannotated protein; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
  
 0.509
GCA_000974605_04836
Unannotated protein.
 
    0.498
CYJ10_20910
Unannotated protein.
       0.478
catA
Unannotated protein.
     
 0.432
hmgA
Unannotated protein; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
     
 0.428
CYJ10_20905
Unannotated protein.
       0.427
GCA_000974605_00535
Unannotated protein.
       0.426
CYJ10_20920
Unannotated protein.
       0.418
Your Current Organism:
Cupriavidus pauculus
NCBI taxonomy Id: 82633
Other names: ATCC 700817, C. pauculus, CCUG 12507, CDC E6793, CDC group IVc-2, CIP 105943, DSM 17313, JCM 11286, LMG 3244, LMG:3244, Ralstonia paucula, Wautersia paucula
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.