STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY68531.1PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: ter:Tery_4448 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; TC 2.C.1.1.1. (207 aa)    
Predicted Functional Partners:
AFY71450.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: amr:AM1_A0164 biopolymer transport protein ExbD/TolR, putative; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR, putative; TC 2.C.1.1.1.
 
 
 0.946
AFY71657.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: cyc:PCC7424_2012 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR.
 
 
 0.943
AFY71448.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: cyn:Cyan7425_2420 TonB family protein; PFAM: TonB, C-terminal; SPTR: TonB family protein; TIGRFAM: TonB, C-terminal.
 
 
 0.883
AFY70448.1
KEGG: ava:Ava_4816 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.758
AFY69356.1
PFAM: Surface antigen variable number repeat; Surface antigen; POTRA domain, ShlB-type; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: ana:alr2269 hypothetical protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Surface antigen variable number.
  
     0.579
AFY71142.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.567
AFY70821.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: cyb:CYB_2385 YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative membrane protein, YjgP/YjgQ family.
  
     0.559
AFY71873.1
PFAM: Protein of unknown function (DUF3084); COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: cyn:Cyan7425_4470 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.541
AFY70820.1
Sulfate-transporting ATPase; PFAM: ABC transporter; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ana:alr4068 ATP-binding protein of ABC transporter; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ATP-binding protein of ABC transporter.
 
   
 0.530
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.477
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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