STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ13854.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (319 aa)    
Predicted Functional Partners:
SFQ13880.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
SFQ13905.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.999
SFQ13920.1
Nucleoside-binding protein.
 
 
 0.988
SFQ32766.1
Nucleoside-binding protein.
 
 
 0.981
rbsA
Ribose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  0.696
SFQ19783.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.510
SFQ13809.1
Predicted Zn-dependent peptidase.
       0.499
SFQ13833.1
Predicted Zn-dependent peptidase.
       0.499
SFQ13786.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.429
Your Current Organism:
Desemzia incerta
NCBI taxonomy Id: 82801
Other names: ATCC 8363, Bacterium incertum, Brevibacterium incertum, CCUG 38799, CIP 104227, CIP 106501, D. incerta, DSM 20581, IFO 12145, NBRC 12145, NCIB 9892, NCIB:9892, NCIMB 9892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.