STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40128.1Hydrogenase; Pfam:pfam00355 Rieske [2Fe-2S] domain. (465 aa)    
Predicted Functional Partners:
AMS40127.1
Hypothetical protein; Pfam:pfam00866 Ring hydroxylating beta subunit.
 
 
 0.991
AMS40108.1
Small subunit of phenylpropionate dioxygenase; Pfam:pfam00866 Ring hydroxylating beta subunit.
 
 
 0.965
AMS40131.1
Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 
  
 0.777
AMS40132.1
Pyridine nucleotide-disulfide oxidoreductase domain protein; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
   
 0.730
AMS40129.1
Pfam:pfam07729 FCD domain.
  
    0.700
AMS43008.1
Vanillate O-demethylase oxidoreductase; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 
  
 0.689
AMS39257.1
Hypothetical protein; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
  
 0.633
AMS40580.1
Hypothetical protein; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
  
 0.629
AMS40130.1
Hypothetical protein.
       0.598
AMS40610.1
Oxidoreductase; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 
  
 0.557
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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