STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH21725.1Sulfur-oxidizing protein SoxY. (156 aa)    
Predicted Functional Partners:
SDH21687.1
Sulfur-oxidizing protein SoxZ.
 
 
 0.998
SDH21654.1
Cytochrome c.
 
  
 0.924
SDG73654.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
    
 0.825
SDH21616.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
   
 0.813
cysN
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.767
msrP
Sulfoxide reductase catalytic subunit YedY; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to re [...]
    
 0.745
cysD
Sulfate adenylyltransferase subunit 2.
     
 0.672
SDG37877.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
     
 0.666
SDG92694.1
Sulfate transport system ATP-binding protein; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
     
 0.632
SDG92797.1
Sulfate transport system substrate-binding protein.
     
 0.632
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.