STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL43785.1Putative glutamate decarboxylase; silverDB:HdN1F274. (558 aa)    
Predicted Functional Partners:
glsI
Ferredoxin-dependent glutamate synthase; silverDB:HdN1F4117.
    
 0.950
panC
Pantoate-beta-alanine ligase/ pantothenate synthase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.944
gdhA
Glutamate/leucine/phenylalanine/valine dehydrogenase; silverDB:HdN1F1222; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.919
ggt
Gamma-glutamyltranspeptidase precursor; silverDB:HdN1F671.
     
 0.916
CBL46268.1
Aldehyde dehydrogenase; silverDB:HdN1F3599; Belongs to the aldehyde dehydrogenase family.
   
 0.914
CBL46783.1
Aldehyde dehydrogenase; silverDB:HdN1F4276; Belongs to the aldehyde dehydrogenase family.
   
 0.914
glnA1
Glutamine synthetase; silverDB:HdN1F955.
    
 0.913
glnA2
Glutamine synthetase protein; silverDB:HdN1F4124.
    
 0.913
putA
Proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.911
gdh
NAD-glutamate dehydrogenase; silverDB:HdN1F4113.
     
 0.904
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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