STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL44133.1Protein of unknown function, DUF482; silverDB:HdN1F700. (345 aa)    
Predicted Functional Partners:
CBL44132.1
Polysaccharide deacetylase family protein; silverDB:HdN1F698.
 
     0.873
CBL44131.1
Conserved hypothetical protein; silverDB:HdN1F697.
 
     0.844
CBL44128.1
Polysaccharide chain length determinant protein; silverDB:HdN1F692.
 
     0.794
CBL44140.1
O-antigen polymerase; silverDB:HdN1F708.
 
   
 0.786
CBL47045.1
Two-component signal transduction histidine kinase; silverDB:HdN1F4610.
  
     0.771
wza
Polysaccharide export protein; silverDB:HdN1F691.
 
     0.766
rfaG2
Putative glycosyltransferase; silverDB:HdN1F778.
 
     0.750
CBL44126.1
Bacterial sugar transferase; silverDB:HdN1F689.
 
     0.732
CBL44129.1
Polysaccharide biosynthesis protein; silverDB:HdN1F693.
 
   
 0.718
CBL47042.1
Hypothetical protein; silverDB:HdN1F4605.
 
     0.718
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.