STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hlyDType I secretion membrane fusion protein (Hemolysin secretion protein D); silverDB:HdN1F3148. (451 aa)    
Predicted Functional Partners:
hlyB
Type I secretion system ATPase; silverDB:HdN1F3149.
 
 0.995
CBL45948.1
Hemolysin-type calcium-binding protein; silverDB:HdN1F3146.
 
  
 0.949
macB
Putative ABC transporter, ATP-binding protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.901
CBL45949.1
Hypothetical protein; silverDB:HdN1F3147.
       0.773
tolC1
Type I secretion outer membrane efflux protein; silverDB:HdN1F1354.
  
 
 0.679
tolC2
Type I secretion outer membrane efflux protein; silverDB:HdN1F1996.
  
 
 0.679
CBL43621.1
Putative outer membrane protein; silverDB:HdN1F46.
  
 
 0.662
CBL44076.1
Predicted outer membrane efflux protein; silverDB:HdN1F626.
  
 
 0.662
CBL45972.1
Outer membrane protein; silverDB:HdN1F3175.
  
 
 0.662
CBL46260.1
Conserved hypothetical protein; silverDB:HdN1F3585.
 
  
 0.571
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.