STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL47084.1Hypothetical protein; silverDB:HdN1F4657. (182 aa)    
Predicted Functional Partners:
CBL47085.1
Conserved hypothetical protein; silverDB:HdN1F4658.
 
     0.936
CBL47086.1
Hypothetical protein; silverDB:HdN1F4660.
 
     0.936
CBL47082.1
Hypothetical protein; silverDB:HdN1F4655.
 
     0.931
CBL47083.1
Lytic transglycosylase, catalytic; silverDB:HdN1F4656.
 
     0.922
CBL47080.1
Hypothetical protein; silverDB:HdN1F4651.
 
     0.867
CBL47091.1
Probable phage associated protein; silverDB:HdN1F4666.
 
     0.839
CBL47092.1
Conserved hypothetical protein; silverDB:HdN1F4667.
 
     0.835
CBL47093.1
Hypothetical protein; silverDB:HdN1F4668.
 
     0.835
CBL47078.1
Conserved hypothetical protein; silverDB:HdN1F4649.
 
     0.816
CBL45384.1
Hypothetical protein; silverDB:HdN1F2387.
 
     0.784
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.