STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tac1Olfactomedin 2; Tachykinins are active peptides which excite neurons, evoke behavioral responses, are potent vasodilators and secretagogues, and contract (directly or indirectly) many smooth muscles. Belongs to the tachykinin family. (113 aa)    
Predicted Functional Partners:
tacr1
Chromosome 16 open reading frame 87; Belongs to the G-protein coupled receptor 1 family.
    
 0.971
VIP
Vasoactive intestinal peptide.
   
  
 0.905
tac3
Tachykinin 3.
      
 0.745
agt
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.728
tacr3
Ectodermal-neural cortex 1 (with BTB domain); Belongs to the G-protein coupled receptor 1 family.
    
 
 0.724
sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
 
 0.688
NTS
Neurotensin.
   
  
 0.670
sst.1
Somatostatin domain-containing protein.
   
  
 0.667
sdhaf4
MGC89089 protein.
   
 
 0.619
rnf149-2
Ring finger protein 149.
      
 0.603
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.