STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXETP00000003955Actin, cytoplasmic 1 Actin, cytoplasmic 1, N-terminally processed. (662 aa)    
Predicted Functional Partners:
gpd1l
Glycerol-3-phosphate dehydrogenase 1-like protein; Plays a role in regulating cardiac sodium current.
    
 0.959
gpd1
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
 0.959
agps
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
    
 0.956
gpd2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.945
gnpat
PQ loop repeat containing 2 like; Belongs to the GPAT/DAPAT family.
  
  
 
0.901
agpat1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
 
 0.886
agpat3
Chromosome 19 open reading frame 44.
  
 
 0.870
LOC108647603
PlsC domain-containing protein.
  
 
 0.870
agpat5
Meningioma (disrupted in balanced translocation) 1.
  
 
 0.869
lclat1
TIP41-like protein.
  
 
 0.868
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.