STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bbs10DENN/MADD domain containing 1B. (643 aa)    
Predicted Functional Partners:
cct2
Chaperonin containing TCP1, subunit 2 (Beta).
   
 0.975
cct5
Chaperonin containing TCP1, subunit 5 (Epsilon).
   
 0.972
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 0.971
cct8
Uncharacterized protein.
   
0.965
cct6a
Uncharacterized protein.
   
 
0.957
cct3
Uncharacterized protein.
   
 0.945
fam161a
Protein FAM161A; Involved in ciliogenesis; Belongs to the FAM161 family.
   
 0.896
cct4
T-complex protein 1 subunit delta.
   
 0.896
emc2-2
Uncharacterized protein.
   
 0.851
ENSXETP00000007785
Alanyl-tRNA synthetase.
   
 0.851
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.