STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a1Schwannomin interacting protein 1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (349 aa)    
Predicted Functional Partners:
cs
Citrate synthase, mitochondrial.
   
 
 0.841
pole2
Uncharacterized protein.
   
   0.596
slc25a4
Solute carrier family 25 (Mitochondrial carrier; adenine nucleotide translocator), member 4; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
0.589
slc25a5
Adenine nucleotide translocase; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
0.589
cxorf56
UPF0428 protein CXorf56 homolog.
    
   0.574
drg1
OBG-type G domain-containing protein.
    
   0.574
grn
Trafficking protein particle complex 11.
    
   0.574
c15orf40
Uncharacterized protein.
    
   0.574
acly
Leucine-rich repeat neuronal 1-like.
   
 
 0.529
mrpl40
Uncharacterized protein.
      
 0.510
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.