Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUL2 | RBX1 | ENSXETP00000029860 | ENSXETP00000003390 | Cullin 2; Belongs to the cullin family. | Ring-box 1. | 0.995 |
CUL2 | cacul1 | ENSXETP00000029860 | ENSXETP00000002242 | Cullin 2; Belongs to the cullin family. | Aminomethyltransferase; Belongs to the cullin family. | 0.411 |
CUL2 | cul1 | ENSXETP00000029860 | ENSXETP00000008178 | Cullin 2; Belongs to the cullin family. | Complexin 1; Belongs to the cullin family. | 0.496 |
CUL2 | cul3 | ENSXETP00000029860 | ENSXETP00000020164 | Cullin 2; Belongs to the cullin family. | Cullin-3; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). The E3 ubiquitin-protein ligase activity of the complex is dependent on the neddylation of the cullin subunit (By similarity). Involved in ER- Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division (By similarity). May play a role in the regulation of mittotic entry via ubiquitinati [...] | 0.766 |
CUL2 | cul5 | ENSXETP00000029860 | ENSXETP00000041573 | Cullin 2; Belongs to the cullin family. | Fibroblast growth factor receptor like 1; Belongs to the cullin family. | 0.725 |
CUL2 | dcun1d1 | ENSXETP00000029860 | ENSXETP00000006250 | Cullin 2; Belongs to the cullin family. | Uncharacterized protein. | 0.515 |
CUL2 | nedd8 | ENSXETP00000029860 | ENSXETP00000037453 | Cullin 2; Belongs to the cullin family. | Neural cell expressed, developmentally down-regulated 8. | 0.961 |
RBX1 | CUL2 | ENSXETP00000003390 | ENSXETP00000029860 | Ring-box 1. | Cullin 2; Belongs to the cullin family. | 0.995 |
RBX1 | cacul1 | ENSXETP00000003390 | ENSXETP00000002242 | Ring-box 1. | Aminomethyltransferase; Belongs to the cullin family. | 0.658 |
RBX1 | cul1 | ENSXETP00000003390 | ENSXETP00000008178 | Ring-box 1. | Complexin 1; Belongs to the cullin family. | 0.999 |
RBX1 | cul3 | ENSXETP00000003390 | ENSXETP00000020164 | Ring-box 1. | Cullin-3; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). The E3 ubiquitin-protein ligase activity of the complex is dependent on the neddylation of the cullin subunit (By similarity). Involved in ER- Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division (By similarity). May play a role in the regulation of mittotic entry via ubiquitinati [...] | 0.966 |
RBX1 | cul5 | ENSXETP00000003390 | ENSXETP00000041573 | Ring-box 1. | Fibroblast growth factor receptor like 1; Belongs to the cullin family. | 0.980 |
RBX1 | dcun1d1 | ENSXETP00000003390 | ENSXETP00000006250 | Ring-box 1. | Uncharacterized protein. | 0.735 |
RBX1 | nedd8 | ENSXETP00000003390 | ENSXETP00000037453 | Ring-box 1. | Neural cell expressed, developmentally down-regulated 8. | 0.973 |
RBX1 | ube2f | ENSXETP00000003390 | ENSXETP00000051271 | Ring-box 1. | NEDD8-conjugating enzyme UBE2F; Accepts the ubiquitin-like protein NEDD8 from the uba3-nae1 E1 complex and catalyzes its covalent attachment to other proteins. The specific interaction with the E3 ubiquitin ligase rbx2, but not rbx1, suggests that the rbx2-ube2f complex neddylates specific target proteins, such as cul5; Belongs to the ubiquitin-conjugating enzyme family. UBE2F subfamily. | 0.884 |
RBX1 | ube2m | ENSXETP00000003390 | ENSXETP00000041571 | Ring-box 1. | NEDD8-conjugating enzyme Ubc12; Accepts the ubiquitin-like protein NEDD8 from the UBA3-NAE1 E1 complex and catalyzes its covalent attachment to other proteins. The specific interaction with the E3 ubiquitin ligase rbx1, but not rbx2, suggests that the rbx1-ube2m complex neddylates specific target proteins, such as cul1, cul2, cul3 and cul4. Involved in cell proliferation (By similarity); Belongs to the ubiquitin-conjugating enzyme family. UBC12 subfamily. | 0.957 |
cacul1 | CUL2 | ENSXETP00000002242 | ENSXETP00000029860 | Aminomethyltransferase; Belongs to the cullin family. | Cullin 2; Belongs to the cullin family. | 0.411 |
cacul1 | RBX1 | ENSXETP00000002242 | ENSXETP00000003390 | Aminomethyltransferase; Belongs to the cullin family. | Ring-box 1. | 0.658 |
cacul1 | cul5 | ENSXETP00000002242 | ENSXETP00000041573 | Aminomethyltransferase; Belongs to the cullin family. | Fibroblast growth factor receptor like 1; Belongs to the cullin family. | 0.481 |
cacul1 | dcun1d1 | ENSXETP00000002242 | ENSXETP00000006250 | Aminomethyltransferase; Belongs to the cullin family. | Uncharacterized protein. | 0.517 |
page 1 of 5