STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fstl3Follistatin-like 3 (Secreted glycoprotein). (255 aa)    
Predicted Functional Partners:
INHBA
Inhibin subunit beta A.
    
 
 0.801
gdf11.1
ATR interacting protein.
    
 
 0.788
mstn.2
Ubiquitin associated protein 2.
    
 
 0.576
mstn.1
Lin-37 DREAM MuvB core complex component.
    
 
 0.576
INHBB
Inhibin subunit beta B.
    
 
 0.548
INHBC
Inhibin subunit beta C.
    
 
 0.503
fsd1l
Structural maintenance of chromosomes flexible hinge domain containing 1.
      
 0.414
fsd1
Uncharacterized protein.
      
 0.414
acp5
Tartrate-resistant acid phosphatase type 5.
      
 0.410
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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