STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myh6D-tyrosyl-tRNA deacylase 2 (putative); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1953 aa)    
Predicted Functional Partners:
myl4
4-aminobutyrate aminotransferase.
   
 0.938
myl2
Adaptor related protein complex 5 subunit zeta 1.
   
 0.938
myl3
Myosin, light chain 3, alkali ventricular, skeletal, slow.
   
 0.938
LOC100485637
Glypican 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
  
  
 
0.900
acta4
Actin, alpha sarcomeric/skeletal; Actins are highly conserved proteins that are involved in various types of cell motility; Belongs to the actin family.
   
 0.754
MGC75582
Actin, alpha cardiac muscle 2; Actins are highly conserved proteins that are involved in various types of cell motility.
   
 0.754
acta1
Actin, alpha 1, skeletal muscle.
   
 0.754
actc1
Actin, alpha cardiac muscle 1, intermediate form; Actins are highly conserved proteins that are involved in various types of cell motility; Belongs to the actin family.
   
 0.754
myl1
Uncharacterized protein.
   
 
 0.632
actg1
Actin, cytoplasmic 2, N-terminally processed; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.
   
 
 0.587
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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