STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
camk4Forkhead box F2; Belongs to the protein kinase superfamily. (424 aa)    
Predicted Functional Partners:
calm2
Calmodulin 1 (Phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.941
calml4
Calmodulin-like protein 4; Belongs to the calmodulin family.
   
 0.921
HDAC4
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
   
  0.903
hdac5
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
   
  0.903
LOC100496389
Peroxisomal biogenesis factor 14.
  
  
 
0.902
DCX
Doublecortin.
 
  
 
 0.564
rassf7
Forkhead box protein C1.
      
 0.525
camk1g
Calcium/calmodulin-dependent protein kinase IG.
    
 
 0.453
CALM2
Calmodulin 1 (phosphorylase kinase, delta).
   
 
 0.441
slc25a4
Solute carrier family 25 (Mitochondrial carrier; adenine nucleotide translocator), member 4; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.423
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.