STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etv6Ets variant 6 (451 aa)    
Predicted Functional Partners:
cdc5l
CDC5 cell division cycle 5-like
   
   0.897
tti1
Tel2 interacting protein 1 homolog (S. pombe)
      
 0.790
NTRK3
Neurotrophic tyrosine kinase, receptor, type 3
    
 
 0.763
abl1
C-abl oncogene 1, non-receptor tyrosine kinase
    
 
 0.700
gfi1b
Growth factor independent 1B transcription repressor
    
 
 0.685
spi1
Spi-1 proto-oncogene; Spleen focus forming virus (SFFV) proviral integration oncogene spi1
   
  
 0.649
lmo2
Rhombotin-2; Transcription factor that acts synergistically with tal1/scl and gata1 to specify embryonic dorsal mesoderm to a hematopoietic fate. Induces globin gene expression together with fgf (By similarity)
    
 
 0.644
gata2
GATA binding protein 2
      
 0.644
ikzf1
IKAROS family zinc finger 1 (Ikaros)
   
 
 0.602
gata1
GATA binding protein 1 (globin transcription factor 1)
      
 0.601
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. (Silurana) tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, Xenopus tropicalis, western clawed frog
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