STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capn15Uncharacterized protein; Belongs to the peptidase C2 family. (1065 aa)    
Predicted Functional Partners:
mamld1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1.
    
 
 0.739
TFB2M
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
      
 0.728
cast
Uncharacterized protein.
   
 
 0.618
capns2
Calpain, small subunit 1.
   
 
 0.607
znf236
G protein-coupled receptor 89B.
   
 
 0.602
capn11
Major facilitator superfamily domain containing 13A.
      
 0.457
rasgrf2
CTD small phosphatase 1.
   
  
 0.424
hprt1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
      
 0.414
iqce
Aldehyde dehydrogenase 16 family member A1.
    
 
 0.410
mpc2-2
Deoxycytidine kinase, gene 2.
   
 
 0.400
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.