Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DAXX | hipk1 | ENSXETP00000047764 | ENSXETP00000004648 | Death domain associated protein. | Protein kinase domain-containing protein. | 0.478 |
DAXX | hipk2 | ENSXETP00000047764 | ENSXETP00000003861 | Death domain associated protein. | Protein kinase domain-containing protein. | 0.673 |
DAXX | hipk3 | ENSXETP00000047764 | ENSXETP00000029987 | Death domain associated protein. | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | 0.478 |
DAXX | sumo1 | ENSXETP00000047764 | ENSXETP00000051987 | Death domain associated protein. | Small ubiquitin-related modifier 1; Ubiquitin-like protein that can be covalently attached to proteins as a monomer or a lysine-linked polymer. Covalent attachment via an isopeptide bond to its substrates requires prior activation by the E1 complex sae1-sae2 and linkage to the E2 enzyme ube2i. This post- translational modification on lysine residues of proteins plays a crucial role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Polymeric sumo1 chains are also susceptible to polyubiquitination which functions as [...] | 0.955 |
DAXX | tp53 | ENSXETP00000047764 | ENSXETP00000041856 | Death domain associated protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.911 |
RASSF5 | hipk1 | ENSXETP00000025506 | ENSXETP00000004648 | Ras association domain family member 5. | Protein kinase domain-containing protein. | 0.907 |
RASSF5 | hipk2 | ENSXETP00000025506 | ENSXETP00000003861 | Ras association domain family member 5. | Protein kinase domain-containing protein. | 0.909 |
RASSF5 | hipk3 | ENSXETP00000025506 | ENSXETP00000029987 | Ras association domain family member 5. | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | 0.905 |
actr6 | hipk1 | ENSXETP00000018059 | ENSXETP00000004648 | Uncharacterized protein; Belongs to the actin family. | Protein kinase domain-containing protein. | 0.597 |
dcaf7 | hipk1 | ENSXETP00000015715 | ENSXETP00000004648 | WD repeat domain 68. | Protein kinase domain-containing protein. | 0.703 |
dcaf7 | hipk2 | ENSXETP00000015715 | ENSXETP00000003861 | WD repeat domain 68. | Protein kinase domain-containing protein. | 0.760 |
dcaf7 | hipk3 | ENSXETP00000015715 | ENSXETP00000029987 | WD repeat domain 68. | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | 0.703 |
hipk1 | DAXX | ENSXETP00000004648 | ENSXETP00000047764 | Protein kinase domain-containing protein. | Death domain associated protein. | 0.478 |
hipk1 | RASSF5 | ENSXETP00000004648 | ENSXETP00000025506 | Protein kinase domain-containing protein. | Ras association domain family member 5. | 0.907 |
hipk1 | actr6 | ENSXETP00000004648 | ENSXETP00000018059 | Protein kinase domain-containing protein. | Uncharacterized protein; Belongs to the actin family. | 0.597 |
hipk1 | dcaf7 | ENSXETP00000004648 | ENSXETP00000015715 | Protein kinase domain-containing protein. | WD repeat domain 68. | 0.703 |
hipk1 | hipk2 | ENSXETP00000004648 | ENSXETP00000003861 | Protein kinase domain-containing protein. | Protein kinase domain-containing protein. | 0.901 |
hipk1 | hipk3 | ENSXETP00000004648 | ENSXETP00000029987 | Protein kinase domain-containing protein. | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | 0.909 |
hipk1 | mbl2 | ENSXETP00000004648 | ENSXETP00000020132 | Protein kinase domain-containing protein. | Microtubule associated protein tau. | 0.415 |
hipk1 | rita1 | ENSXETP00000004648 | ENSXETP00000022789 | Protein kinase domain-containing protein. | Leucine rich repeat neuronal 4. | 0.578 |
page 1 of 3