STRINGSTRING
socs4 protein (Xenopus tropicalis) - STRING interaction network
"socs4" - Suppressor of cytokine signaling 4 in Xenopus tropicalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
socs4Suppressor of cytokine signaling 4 (436 aa)    
Predicted Functional Partners:
tceb1
Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C); Belongs to the SKP1 family (112 aa)
       
 
  0.998
tceb2
Elongin B; Transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) (119 aa)
       
 
  0.942
insr
Tyrosine-protein kinase receptor; Insulin receptor (1317 aa)
       
  0.837
sept7
Septin 7; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Septin GTPase family (445 aa)
     
 
  0.707
cul5
Cullin 5 ; Belongs to the cullin family (780 aa)
     
 
  0.695
acsm3
acyl-CoA synthetase medium-chain family member 3 (582 aa)
           
  0.678
jak1
Janus kinase 1 (a protein tyrosine kinase) (1141 aa)
       
 
  0.653
dclk2
Doublecortin-like kinase 2 (752 aa)
           
  0.606
tecr
Gpsn2 protein; trans-2,3-enoyl-CoA reductase (346 aa)
           
  0.603
nck1
NCK adaptor protein 1 (377 aa)
       
 
  0.599
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. (Silurana) tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, Xenopus tropicalis, western clawed frog
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