STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acox1-3Beclin-1; Belongs to the G-protein coupled receptor 1 family. (302 aa)    
Predicted Functional Partners:
ncam2
Uncharacterized protein.
    
  0.903
LOC100491668
Calcium channel, voltage-dependent, gamma subunit 1.
     
  0.800
alox12b
RNA guanylyltransferase and 5'-phosphatase.
     
  0.540
mtbp
Mdm2-binding protein; May play a role in mdm2-dependent p53/TP53 homeostasis in unstressed cells. Inhibits autoubiquitination of mdm2, thereby enhancing mdm2 stability. This promotes mdm2-mediated ubiquitination of p53/TP53 and its subsequent degradation (By similarity).
    
  0.540
IVNS1ABP
Influenza virus NS1A binding protein.
     
  0.540
KCNN2
Potassium calcium-activated channel subfamily N member 2.
     
  0.540
socs4
Fibroblast growth factor binding protein 2.
     
  0.540
pik3r5
Phosphoinositide-3-kinase, regulatory subunit 5, p101.
     
  0.540
vac14
Uncharacterized protein.
     
  0.540
socs3
Suppressor of cytokine signaling 3.
     
  0.540
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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