STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eef1gUncharacterized protein. (442 aa)    
Predicted Functional Partners:
vars
Kinesin family member 18A; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
0.999
eef1d
Eukaryotic translation elongation factor 1 delta; Belongs to the EF-1-beta/EF-1-delta family.
   
 
 0.999
eprs1
Solute carrier family 12, member 9.
   
 
 0.999
eef1b2
Elongation factor 1-beta; EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP.
   
 
 0.999
mars1
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.997
tpt1
Translationally-controlled tumor protein homolog; Involved in calcium binding and microtubule stabilization. Belongs to the TCTP family.
   
 
 0.992
rpl4
60S ribosomal protein L4; Belongs to the universal ribosomal protein uL4 family.
   
 
 0.990
rps15
UDP glycosyltransferase 3 family, polypeptide A2; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.989
eef2.2
Tr-type G domain-containing protein.
   
 
 0.989
rpl6
Mitochondrial ribosome recycling factor.
   
 
 0.989
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.