Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEP290 | RPGRIP1L | ENSXETP00000043540 | ENSXETP00000007459 | Centrosomal protein 290. | RPGRIP1 like. | 0.719 |
CEP290 | b9d1 | ENSXETP00000043540 | ENSXETP00000016410 | Centrosomal protein 290. | B9 domain-containing protein 1; Component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling (By similarity). | 0.735 |
CEP290 | cc2d2a | ENSXETP00000043540 | ENSXETP00000027223 | Centrosomal protein 290. | 7-dehydrocholesterol reductase. | 0.764 |
CEP290 | iqcb1 | ENSXETP00000043540 | ENSXETP00000032488 | Centrosomal protein 290. | Uncharacterized protein. | 0.921 |
CEP290 | nphp1 | ENSXETP00000043540 | ENSXETP00000028739 | Centrosomal protein 290. | Nuclear factor I C. | 0.768 |
CEP290 | nphp4.2 | ENSXETP00000043540 | ENSXETP00000010859 | Centrosomal protein 290. | Vac14 homolog. | 0.518 |
CEP290 | slc6a19-2 | ENSXETP00000043540 | ENSXETP00000011570 | Centrosomal protein 290. | Solute carrier family 6 (neutral amino acid transporter), member 19. | 0.518 |
CEP290 | tmem237 | ENSXETP00000043540 | ENSXETP00000027566 | Centrosomal protein 290. | Transmembrane protein 237; Component of the transition zone in primary cilia. Required for ciliogenesis (By similarity); Belongs to the TMEM237 family. | 0.572 |
CEP290 | tmem67 | ENSXETP00000043540 | ENSXETP00000031209 | Centrosomal protein 290. | Sideroflexin 5. | 0.744 |
RPGRIP1L | CEP290 | ENSXETP00000007459 | ENSXETP00000043540 | RPGRIP1 like. | Centrosomal protein 290. | 0.719 |
RPGRIP1L | b9d1 | ENSXETP00000007459 | ENSXETP00000016410 | RPGRIP1 like. | B9 domain-containing protein 1; Component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling (By similarity). | 0.734 |
RPGRIP1L | cc2d2a | ENSXETP00000007459 | ENSXETP00000027223 | RPGRIP1 like. | 7-dehydrocholesterol reductase. | 0.733 |
RPGRIP1L | iqcb1 | ENSXETP00000007459 | ENSXETP00000032488 | RPGRIP1 like. | Uncharacterized protein. | 0.710 |
RPGRIP1L | nphp1 | ENSXETP00000007459 | ENSXETP00000028739 | RPGRIP1 like. | Nuclear factor I C. | 0.891 |
RPGRIP1L | nphp4.2 | ENSXETP00000007459 | ENSXETP00000010859 | RPGRIP1 like. | Vac14 homolog. | 0.753 |
RPGRIP1L | pde6d | ENSXETP00000007459 | ENSXETP00000043757 | RPGRIP1 like. | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...] | 0.756 |
RPGRIP1L | slc6a19-2 | ENSXETP00000007459 | ENSXETP00000011570 | RPGRIP1 like. | Solute carrier family 6 (neutral amino acid transporter), member 19. | 0.753 |
RPGRIP1L | tmem237 | ENSXETP00000007459 | ENSXETP00000027566 | RPGRIP1 like. | Transmembrane protein 237; Component of the transition zone in primary cilia. Required for ciliogenesis (By similarity); Belongs to the TMEM237 family. | 0.762 |
RPGRIP1L | tmem67 | ENSXETP00000007459 | ENSXETP00000031209 | RPGRIP1 like. | Sideroflexin 5. | 0.695 |
b9d1 | CEP290 | ENSXETP00000016410 | ENSXETP00000043540 | B9 domain-containing protein 1; Component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling (By similarity). | Centrosomal protein 290. | 0.735 |
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