STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thbs3Uncharacterized protein. (850 aa)    
Predicted Functional Partners:
MTX3
Metaxin.
    
 
 0.475
CDC42BPB
CDC42 binding protein kinase beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 
 0.463
mpp7
MAGUK p55 subfamily member 7; Acts as an important adapter that promotes epithelial cell polarity and tight junction formation. Involved in the assembly of protein complexes at sites of cell-cell contact (By similarity). Belongs to the MAGUK family.
    
 
 0.455
CEP290
Centrosomal protein 290.
    
 
 0.425
dcn
Decorin; May affect the rate of fibrils formation.
   
 
 0.421
cdc42
Uncharacterized protein.
    
 
 0.409
ranbp2
Mucolipin 2.
   
 
 0.408
flrt2
Wnt family member 1.
    
 
 0.405
trim36
Phosphoinositide-3-kinase adaptor protein 1.
    
 
 0.405
kmt2d
Chromosome 1 open reading frame 50.
    
 
 0.400
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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