Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
chm | ptar1 | ENSXETP00000006318 | ENSXETP00000037728 | Uncharacterized protein. | ATP binding cassette subfamily A member 9. | 0.842 |
chm | rab1a | ENSXETP00000006318 | ENSXETP00000008368 | Uncharacterized protein. | Uncharacterized protein. | 0.476 |
chm | rabggta | ENSXETP00000006318 | ENSXETP00000037666 | Uncharacterized protein. | Protocadherin 20. | 0.930 |
chm | rabggtb | ENSXETP00000006318 | ENSXETP00000035667 | Uncharacterized protein. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.856 |
fbxl20 | ptar1 | ENSXETP00000047582 | ENSXETP00000037728 | Adenylate cyclase 3. | ATP binding cassette subfamily A member 9. | 0.611 |
fbxl20 | rabggtb | ENSXETP00000047582 | ENSXETP00000035667 | Adenylate cyclase 3. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.742 |
fbxl20 | skp1 | ENSXETP00000047582 | ENSXETP00000038428 | Adenylate cyclase 3. | S-phase kinase-associated protein 1A (P19A); Belongs to the SKP1 family. | 0.877 |
fnta | rabggtb | ENSXETP00000037503 | ENSXETP00000035667 | Zinc finger CCHC-type containing 17. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.580 |
nme6 | rabggtb | ENSXETP00000038638 | ENSXETP00000035667 | Nucleoside diphosphate kinase 6; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.569 |
nme6 | wdr47 | ENSXETP00000038638 | ENSXETP00000005217 | Nucleoside diphosphate kinase 6; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | MYCBP associated protein. | 0.412 |
ptar1 | chm | ENSXETP00000037728 | ENSXETP00000006318 | ATP binding cassette subfamily A member 9. | Uncharacterized protein. | 0.842 |
ptar1 | fbxl20 | ENSXETP00000037728 | ENSXETP00000047582 | ATP binding cassette subfamily A member 9. | Adenylate cyclase 3. | 0.611 |
ptar1 | rabggtb | ENSXETP00000037728 | ENSXETP00000035667 | ATP binding cassette subfamily A member 9. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.964 |
ptar1 | skp1 | ENSXETP00000037728 | ENSXETP00000038428 | ATP binding cassette subfamily A member 9. | S-phase kinase-associated protein 1A (P19A); Belongs to the SKP1 family. | 0.776 |
ptar1 | ykt6 | ENSXETP00000037728 | ENSXETP00000050103 | ATP binding cassette subfamily A member 9. | Synaptobrevin homolog YKT6; Vesicular soluble NSF attachment protein receptor (v-SNARE) mediating vesicle docking and fusion to a specific acceptor cellular compartment. Functions in endoplasmic reticulum to Golgi transport; as part of a SNARE complex composed of GOSR1, GOSR2 and STX5. Functions in early/recycling endosome to TGN transport; as part of a SNARE complex composed of BET1L, GOSR1 and STX5. Has a S-palmitoyl transferase activity. | 0.862 |
rab1a | chm | ENSXETP00000008368 | ENSXETP00000006318 | Uncharacterized protein. | Uncharacterized protein. | 0.476 |
rab1a | rabggta | ENSXETP00000008368 | ENSXETP00000037666 | Uncharacterized protein. | Protocadherin 20. | 0.508 |
rab1a | rabggtb | ENSXETP00000008368 | ENSXETP00000035667 | Uncharacterized protein. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.810 |
rab1a | ykt6 | ENSXETP00000008368 | ENSXETP00000050103 | Uncharacterized protein. | Synaptobrevin homolog YKT6; Vesicular soluble NSF attachment protein receptor (v-SNARE) mediating vesicle docking and fusion to a specific acceptor cellular compartment. Functions in endoplasmic reticulum to Golgi transport; as part of a SNARE complex composed of GOSR1, GOSR2 and STX5. Functions in early/recycling endosome to TGN transport; as part of a SNARE complex composed of BET1L, GOSR1 and STX5. Has a S-palmitoyl transferase activity. | 0.590 |
rabggta | chm | ENSXETP00000037666 | ENSXETP00000006318 | Protocadherin 20. | Uncharacterized protein. | 0.930 |
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