Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNTN1 | LOC108644694 | ENSXETP00000000216 | ENSXETP00000001089 | Contactin 1. | Ubiquitin conjugating enzyme E2Q family-like 1. | 0.646 |
CNTN1 | PTPRZ1 | ENSXETP00000000216 | ENSXETP00000051537 | Contactin 1. | Protein tyrosine phosphatase receptor type Z1. | 0.911 |
CNTN1 | l1cam | ENSXETP00000000216 | ENSXETP00000035779 | Contactin 1. | Uncharacterized protein. | 0.530 |
CNTN1 | ptprg | ENSXETP00000000216 | ENSXETP00000023382 | Contactin 1. | Transcription factor A, mitochondrial. | 0.646 |
LOC108644694 | CNTN1 | ENSXETP00000001089 | ENSXETP00000000216 | Ubiquitin conjugating enzyme E2Q family-like 1. | Contactin 1. | 0.646 |
LOC108644694 | cntn2 | ENSXETP00000001089 | ENSXETP00000051212 | Ubiquitin conjugating enzyme E2Q family-like 1. | Polymerase (RNA) II subunit I. | 0.664 |
LOC108644694 | cntn4 | ENSXETP00000001089 | ENSXETP00000043622 | Ubiquitin conjugating enzyme E2Q family-like 1. | Centrosomal protein 131kDa. | 0.775 |
LOC108644694 | cntn5 | ENSXETP00000001089 | ENSXETP00000010682 | Ubiquitin conjugating enzyme E2Q family-like 1. | Sonic hedgehog. | 0.703 |
LOC108644694 | l1cam | ENSXETP00000001089 | ENSXETP00000035779 | Ubiquitin conjugating enzyme E2Q family-like 1. | Uncharacterized protein. | 0.620 |
LOC108644694 | ptprg | ENSXETP00000001089 | ENSXETP00000023382 | Ubiquitin conjugating enzyme E2Q family-like 1. | Transcription factor A, mitochondrial. | 0.886 |
PTPRZ1 | CNTN1 | ENSXETP00000051537 | ENSXETP00000000216 | Protein tyrosine phosphatase receptor type Z1. | Contactin 1. | 0.911 |
PTPRZ1 | cntn2 | ENSXETP00000051537 | ENSXETP00000051212 | Protein tyrosine phosphatase receptor type Z1. | Polymerase (RNA) II subunit I. | 0.571 |
PTPRZ1 | cntn4 | ENSXETP00000051537 | ENSXETP00000043622 | Protein tyrosine phosphatase receptor type Z1. | Centrosomal protein 131kDa. | 0.517 |
PTPRZ1 | cntn5 | ENSXETP00000051537 | ENSXETP00000010682 | Protein tyrosine phosphatase receptor type Z1. | Sonic hedgehog. | 0.520 |
PTPRZ1 | l1cam | ENSXETP00000051537 | ENSXETP00000035779 | Protein tyrosine phosphatase receptor type Z1. | Uncharacterized protein. | 0.459 |
cntn2 | LOC108644694 | ENSXETP00000051212 | ENSXETP00000001089 | Polymerase (RNA) II subunit I. | Ubiquitin conjugating enzyme E2Q family-like 1. | 0.664 |
cntn2 | PTPRZ1 | ENSXETP00000051212 | ENSXETP00000051537 | Polymerase (RNA) II subunit I. | Protein tyrosine phosphatase receptor type Z1. | 0.571 |
cntn2 | l1cam | ENSXETP00000051212 | ENSXETP00000035779 | Polymerase (RNA) II subunit I. | Uncharacterized protein. | 0.955 |
cntn2 | ptprg | ENSXETP00000051212 | ENSXETP00000023382 | Polymerase (RNA) II subunit I. | Transcription factor A, mitochondrial. | 0.664 |
cntn4 | LOC108644694 | ENSXETP00000043622 | ENSXETP00000001089 | Centrosomal protein 131kDa. | Ubiquitin conjugating enzyme E2Q family-like 1. | 0.775 |
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