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rasl10a protein (Xenopus tropicalis) - STRING interaction network
"rasl10a" - RAS-like, family 10, member A in Xenopus tropicalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rasl10aRAS-like, family 10, member A (199 aa)    
Predicted Functional Partners:
rer1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (198 aa)
     
 
  0.582
rab33a
RAB33A, member RAS oncogene family (215 aa)
   
 
  0.533
afdn
Afadin, adherens junction formation factor; Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog); translocated to, 4 (1788 aa)
       
 
  0.464
ripk4
Receptor-interacting serine-threonine kinase 4 (720 aa)
     
 
  0.451
exoc2
Exocyst complex component 2 (928 aa)
       
 
  0.422
rab19
Ras-related protein Rab-19; RAB19, member RAS oncogene family (215 aa)
   
 
  0.404
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. (Silurana) tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, Xenopus tropicalis, western clawed frog
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