STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim9Serine/threonine kinase 35. (788 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.760
btrc
Uncharacterized protein.
    
 
 0.671
cyb5b-2
Cytochrome b5 type B (outer mitochondrial membrane); Belongs to the Toll-like receptor family.
      
 0.647
DCC
DCC netrin 1 receptor.
   
 
 0.638
neo1
Biogenesis of lysosome-related organelles complex 1 subunit 1.
   
 
 0.638
igdcc4
Prolyl 4-hydroxylase subunit beta.
   
 
 0.635
vasp
Neuraminidase 1 (lysosomal sialidase).
    
 
 0.635
LOC100494394
NIMA-related kinase 4.
      
 0.611
trim44
Integrin subunit beta 8.
    
 
 0.582
tlr7
WW domain containing E3 ubiquitin protein ligase 2; Belongs to the Toll-like receptor family.
      
 0.582
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.