STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nkrfSimilar to nkrf (NF-kappaB repressing factor). (791 aa)    
Predicted Functional Partners:
dhx15
ATPase, Ca++ transporting, type 2C, member 1.
    
 
 0.877
dhx32
Mgc79670 protein.
    
 
 0.583
sowahc
ANK_REP_REGION domain-containing protein.
    
 
 0.551
ENSXETP00000010102
TGF_BETA_2 domain-containing protein.
      
 0.508
hspb6
Cysteine/histidine-rich 1; Belongs to the small heat shock protein (HSP20) family.
      
 0.472
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
    
 
 0.468
ank3
Tropomyosin 4.
    
 
 0.427
ANK1
Ankyrin 1.
    
 
 0.426
mzt1
Mitotic-spindle organizing protein 1; Required for gamma-tubulin complex recruitment to the centrosome.
   
 
 0.423
nkap
MGC69335 protein.
   
  
 0.416
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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