STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc7a5Dolichyl-phosphate mannosyltransferase polypeptide 3. (511 aa)    
Predicted Functional Partners:
SLC3A2
Solute carrier family 3 member 2.
   
 0.997
SLC1A1
Amino acid transporter.
   
  
 0.585
slc43a1
Potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4.
   
  
 0.583
SLC7A1
Solute carrier family 7 member 1.
  
 
0.567
LOC100496635
Amino acid transporter.
   
  
 0.560
llgl2
Lethal giant larvae homolog 2.
      
 0.552
slc1a6
Amino acid transporter.
   
  
 0.506
SLC1A2
Amino acid transporter.
   
  
 0.500
slc1a3
Amino acid transporter.
   
  
 0.496
asns
Asparagine synthetase [glutamine-hydrolyzing].
   
  
 0.463
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.