STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ero1bUncharacterized protein. (480 aa)    
Predicted Functional Partners:
p4hb
Protein disulfide-isomerase.
   
 0.956
pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
   
 0.956
pdia6
Methyltransferase like 16; Belongs to the protein disulfide isomerase family.
   
 0.946
txndc5
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
   
 0.944
ero1a
ERO1-like protein alpha; Oxidoreductase involved in disulfide bond formation in the endoplasmic reticulum. Efficiently reoxidizes P4HB/PDI, the enzyme catalyzing protein disulfide formation, in order to allow P4HB to sustain additional rounds of disulfide formation. Following P4HB reoxidation, passes its electrons to molecular oxygen via FAD, leading to the production of reactive oxygen species (ROS) in the cell. Required for the folding of immunoglobulins (By similarity). Belongs to the EROs family.
  
 
 
0.923
erp29
Nuclear receptor subfamily 2 group E member 1.
     
 0.913
sec63
Paired box 2.
   
  
 0.774
hspa5
Neuronal vesicle trafficking associated 1; Belongs to the heat shock protein 70 family.
   
 
 0.687
erp44
Regucalcin.
   
 
 0.677
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 
 0.623
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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