STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vars2Elastin microfibril interfacer 3; Belongs to the class-I aminoacyl-tRNA synthetase family. (1080 aa)    
Predicted Functional Partners:
eef1g
Uncharacterized protein.
 
 
 
 0.955
vars
Kinesin family member 18A; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.930
yars1
Tyrosine--tRNA ligase, cytoplasmic; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).
  
 
 0.929
eprs1
Solute carrier family 12, member 9.
  
 
 0.921
lars1
MGC97760 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.822
iars1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
0.818
mars1
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.815
iars2
NIMA-related kinase 5; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
0.811
lars2
Bone morphogenetic protein 8 (osteogenic protein 2); Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
0.793
GMPS
Guanine monophosphate synthase.
  
  
 0.761
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.