STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asphTPR_REGION domain-containing protein. (1037 aa)    
Predicted Functional Partners:
casq1
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
  
 0.572
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.519
polr3e
Uncharacterized protein.
      
 0.480
Doc2a
C2 domain-containing protein.
      
 0.462
cd276
Glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein.
   
  
 0.435
isyna1
AT-rich interaction domain 1B.
      
 0.412
CACNA2D3
Calcium voltage-gated channel auxiliary subunit alpha2delta 3.
      
 0.412
prmt7-2
Protein arginine methyltransferase 7.
   
  
 0.406
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.