Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACOX3 | SCML4 | ENSXETP00000040629 | ENSXETP00000012475 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Scm polycomb group protein like 4. | 0.540 |
ACOX3 | alox12b | ENSXETP00000040629 | ENSXETP00000002601 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | RNA guanylyltransferase and 5'-phosphatase. | 0.540 |
ACOX3 | fau | ENSXETP00000040629 | ENSXETP00000043316 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.582 |
ACOX3 | grhl2 | ENSXETP00000040629 | ENSXETP00000015679 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Grainyhead-like protein 2 homolog; Transcription factor playing an important role in primary neurulation and in epithelial development. Binds directly to the consensus DNA sequence 5'-AACCGGTT-3' acting as an activator and repressor on distinct target genes. | 0.540 |
ACOX3 | rps4x | ENSXETP00000040629 | ENSXETP00000027056 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.549 |
ACOX3 | thrb | ENSXETP00000040629 | ENSXETP00000050140 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Membrane metallo-endopeptidase-like 1. | 0.562 |
SCML4 | ACOX3 | ENSXETP00000012475 | ENSXETP00000040629 | Scm polycomb group protein like 4. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.540 |
SCML4 | alox12b | ENSXETP00000012475 | ENSXETP00000002601 | Scm polycomb group protein like 4. | RNA guanylyltransferase and 5'-phosphatase. | 0.540 |
SCML4 | fau | ENSXETP00000012475 | ENSXETP00000043316 | Scm polycomb group protein like 4. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.540 |
SCML4 | grhl2 | ENSXETP00000012475 | ENSXETP00000015679 | Scm polycomb group protein like 4. | Grainyhead-like protein 2 homolog; Transcription factor playing an important role in primary neurulation and in epithelial development. Binds directly to the consensus DNA sequence 5'-AACCGGTT-3' acting as an activator and repressor on distinct target genes. | 0.572 |
SCML4 | rps4x | ENSXETP00000012475 | ENSXETP00000027056 | Scm polycomb group protein like 4. | 40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.540 |
SCML4 | thrb | ENSXETP00000012475 | ENSXETP00000050140 | Scm polycomb group protein like 4. | Membrane metallo-endopeptidase-like 1. | 0.546 |
alox12b | ACOX3 | ENSXETP00000002601 | ENSXETP00000040629 | RNA guanylyltransferase and 5'-phosphatase. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.540 |
alox12b | SCML4 | ENSXETP00000002601 | ENSXETP00000012475 | RNA guanylyltransferase and 5'-phosphatase. | Scm polycomb group protein like 4. | 0.540 |
alox12b | fau | ENSXETP00000002601 | ENSXETP00000043316 | RNA guanylyltransferase and 5'-phosphatase. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.593 |
alox12b | grhl2 | ENSXETP00000002601 | ENSXETP00000015679 | RNA guanylyltransferase and 5'-phosphatase. | Grainyhead-like protein 2 homolog; Transcription factor playing an important role in primary neurulation and in epithelial development. Binds directly to the consensus DNA sequence 5'-AACCGGTT-3' acting as an activator and repressor on distinct target genes. | 0.540 |
alox12b | rps4x | ENSXETP00000002601 | ENSXETP00000027056 | RNA guanylyltransferase and 5'-phosphatase. | 40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.540 |
alox12b | thrb | ENSXETP00000002601 | ENSXETP00000050140 | RNA guanylyltransferase and 5'-phosphatase. | Membrane metallo-endopeptidase-like 1. | 0.551 |
fau | ACOX3 | ENSXETP00000043316 | ENSXETP00000040629 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.582 |
fau | SCML4 | ENSXETP00000043316 | ENSXETP00000012475 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Scm polycomb group protein like 4. | 0.540 |
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