Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSXETP00000036075 | sox13 | ENSXETP00000036075 | ENSXETP00000054630 | Uncharacterized protein. | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | 0.432 |
ENSXETP00000051445 | sox13 | ENSXETP00000051445 | ENSXETP00000054630 | Uncharacterized protein. | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | 0.432 |
cep85 | sox13 | ENSXETP00000037848 | ENSXETP00000054630 | Uncharacterized protein. | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | 0.577 |
myh8 | nfya | ENSXETP00000042461 | ENSXETP00000036998 | Kinetochore protein Spc25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Uncharacterized protein. | 0.673 |
myh8 | sox13 | ENSXETP00000042461 | ENSXETP00000054630 | Kinetochore protein Spc25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | 0.540 |
myh8 | trpm7 | ENSXETP00000042461 | ENSXETP00000054158 | Kinetochore protein Spc25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Tsukushin. | 0.546 |
myh8 | tuba1cl.2 | ENSXETP00000042461 | ENSXETP00000025891 | Kinetochore protein Spc25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.552 |
nfya | myh8 | ENSXETP00000036998 | ENSXETP00000042461 | Uncharacterized protein. | Kinetochore protein Spc25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.673 |
nfya | sox13 | ENSXETP00000036998 | ENSXETP00000054630 | Uncharacterized protein. | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | 0.540 |
nfya | trpm7 | ENSXETP00000036998 | ENSXETP00000054158 | Uncharacterized protein. | Tsukushin. | 0.540 |
nfya | tuba1cl.2 | ENSXETP00000036998 | ENSXETP00000025891 | Uncharacterized protein. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.540 |
sox13 | ENSXETP00000036075 | ENSXETP00000054630 | ENSXETP00000036075 | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | Uncharacterized protein. | 0.432 |
sox13 | ENSXETP00000051445 | ENSXETP00000054630 | ENSXETP00000051445 | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | Uncharacterized protein. | 0.432 |
sox13 | cep85 | ENSXETP00000054630 | ENSXETP00000037848 | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | Uncharacterized protein. | 0.577 |
sox13 | myh8 | ENSXETP00000054630 | ENSXETP00000042461 | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | Kinetochore protein Spc25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.540 |
sox13 | nfya | ENSXETP00000054630 | ENSXETP00000036998 | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | Uncharacterized protein. | 0.540 |
sox13 | trip12 | ENSXETP00000054630 | ENSXETP00000003237 | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | E3 ubiquitin-protein ligase TRIP12; E3 ubiquitin-protein ligase involved in ubiquitin fusion degradation (UFD) pathway and regulation of DNA repair. Part of the ubiquitin fusion degradation (UFD) pathway, a process that mediates ubiquitination of protein at their N-terminus, regardless of the presence of lysine residues in target proteins. Acts as a key regulator of DNA damage response by acting as a suppressor of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites, thereby acting as a guard against excessive spr [...] | 0.432 |
sox13 | trpm7 | ENSXETP00000054630 | ENSXETP00000054158 | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | Tsukushin. | 0.540 |
sox13 | tuba1cl.2 | ENSXETP00000054630 | ENSXETP00000025891 | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.540 |
trip12 | sox13 | ENSXETP00000003237 | ENSXETP00000054630 | E3 ubiquitin-protein ligase TRIP12; E3 ubiquitin-protein ligase involved in ubiquitin fusion degradation (UFD) pathway and regulation of DNA repair. Part of the ubiquitin fusion degradation (UFD) pathway, a process that mediates ubiquitination of protein at their N-terminus, regardless of the presence of lysine residues in target proteins. Acts as a key regulator of DNA damage response by acting as a suppressor of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites, thereby acting as a guard against excessive spr [...] | Transcription factor Sox-13; Binds to the sequence 5'-AACAAT-3'. | 0.432 |
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