STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmp16ZnMc domain-containing protein. (612 aa)    
Predicted Functional Partners:
cenpm
Arachidonate 5-lipoxygenase.
     
  0.800
CHAT
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
     
  0.800
cenpn
Centromere protein N; Probable component of a centromeric complex involved in assembly of kinetochore proteins, mitotic progression and chromosome segregation; Belongs to the CENP-N/CHL4 family.
     
  0.800
ENSXETP00000044710
Uncharacterized protein.
    
  0.517
h2bc14
Histone H2B; Belongs to the histone H2B family.
     
  0.499
LOC108648864
Histone H2B; Belongs to the histone H2B family.
     
  0.499
commd4
COMM domain-containing protein.
     
  0.499
tube1
Tubulin, epsilon 1; Belongs to the tubulin family.
     
  0.499
kcnk16
Serine/threonine kinase 26; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
  0.499
h2ac21
Histone H2A; Belongs to the histone H2A family.
     
  0.499
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.