STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL96222.1Hypothetical protein. (392 aa)    
Predicted Functional Partners:
AKL96221.1
Hypothetical protein.
       0.773
pulE
Type II secretory pathway, ATpase PulE.
       0.773
AKL96220.1
Hypothetical protein.
       0.741
pulF1
Type II secretory pathway, component PulF.
       0.726
pulO1
Type II secretory pathway, prepilin signal peptidase PulO.
       0.726
AKL96217.1
Hypothetical protein.
       0.726
fimT
Tfp pilus assembly protein FimT.
       0.726
AKL96219.1
Type II secretory pathway, pseudopilin PulG.
       0.726
pilT2
Twitching mobility protein PilT.
       0.714
AKL96214.1
Hypothetical protein.
       0.460
Your Current Organism:
Clostridium aceticum
NCBI taxonomy Id: 84022
Other names: ATCC 35044, C. aceticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.