STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0056Conserved hypothetical protein. (171 aa)    
Predicted Functional Partners:
rpl20,
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
       0.814
SYNW1520
Conserved hypothetical protein; Predicted membrane protein.
  
     0.724
SYNW1155
Conserved hypothetical protein.
  
     0.720
rpl35,
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
       0.701
SYNW1220
Conserved hypothetical protein.
  
     0.688
thf1
Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
     0.665
SYNW1889
Conserved hypothetical protein; Predicted membrane protein.
  
     0.657
SYNW2510
Conserved hypothetical protein; Predicted membrane protein.
  
     0.635
SYNW0340
Conserved hypothetical protein.
  
     0.612
SYNW0059
Possible amidase enhancer.
 
     0.598
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.