STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreCPutative rod shape-determining protein. (248 aa)    
Predicted Functional Partners:
mreB
Rod shape determining protein.
 
 
 0.990
SYNW0124
Conserved hypothetical.
  
 
 0.988
SYNW0050
Putative penicillin-binding protein.
 
 
 0.890
SYNW2436
Conserved hypothetical protein.
  
 
 0.866
minC
Possible septum site-determining protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
  
  
 0.863
SYNW0125
Putative sugar-binding protein.
  
    0.813
rodA
Cell division protein possibly involved in shape determination; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
  
 0.809
minD
Putative septum site-determining protein MinD.
  
    0.727
ftsI
Putative peptidoglycan synthetase (pbp transpeptidase domain).
  
 
 0.660
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.593
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.