STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0139Conserved hypothetical protein. (205 aa)    
Predicted Functional Partners:
SYNW1850
Conserved hypothetical protein.
  
     0.773
SYNW0265
Conserved hypothetical protein.
  
     0.770
SYNW2505
Conserved hypothetical protein.
  
     0.765
SYNW0946
Conserved hypothetical protein; Predicted membrane protein.
  
     0.763
SYNW0902
Conserved hypothetical protein.
  
     0.762
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.761
SYNW0136
Conserved hypothetical protein.
       0.761
SYNW0137
Zinc metallopeptidase M20/M25/M40 family.
       0.761
glgX
Possible glycogen operon protein GlgX; Probable pseudogene. N terminus end of a glgX gene which is frameshifted.
  
     0.758
SYNW0138
Conserved hypothetical protein.
       0.757
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.