STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0185Conserved hypothetical. (281 aa)    
Predicted Functional Partners:
kpsF
Putative polysialic acid capsule expression protein KpsF; Citation: Tzeng et al. (2002) J. Biol. Chem. 277:24103-24113; Belongs to the SIS family. GutQ/KpsF subfamily.
       0.804
SYNW0186
Possible phosphatase.
       0.774
SYNW0079
Hypothetical.
  
     0.643
SYNW0188
Possible polyA polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
   0.590
SYNW0189
Conserved hypothetical protein; Q8Z772 (Q8Z772) Putative membrane protein, Length = 516 Score = 70.1 bits (170), Expect = 5e-11 Identities = 98/370 (26%).
       0.573
SYNW0399
Possible polysaccharide export protein.
  
    0.545
SYNW0311
Conserved hypothetical protein.
  
 
 0.533
SYNW0400
Similar to capsule polysaccharide protein kpsS; Possible polysaccharide modification protein.
 
  
 0.498
SYNW1829
Conserved hypothetical protein.
  
     0.494
SYNW0517
Hypothetical.
  
     0.474
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.