STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0190Conserved hypothetical protein. (674 aa)    
Predicted Functional Partners:
SYNW0687
Putative thioredoxin reductase.
   
 0.968
SYNW0322
Putative cysteine desulfurase or selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
 0.919
SYNW1066
Conserved hypothetical protein.
 
   
 0.864
galE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.794
SYNW1170
Putative phosphonate binding protein for ABC transporter.
 
     0.623
SYNW0192
Conserved hypothetical protein.
       0.548
SYNW0193
Putative multidrug efflux ABC transporter.
       0.548
SYNW0194
Possible similar to leukotoxin secretion protein.
       0.548
SYNW0195
Putative glycosyltransferase.
       0.548
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT.
      
 0.546
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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